STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aor4Aldehyde ferredoxin oxidoreductase. (646 aa)    
Predicted Functional Partners:
aor2
Aldehyde ferredoxin oxidoreductase.
  
  
 
0.916
aor1
Aldehyde ferredoxin oxidoreductase.
  
  
 
0.915
NP_1162A
DUF4147 domain protein.
     
  0.900
samp3
Ubiquitin-like modifier protein SAMP3.
 
     0.683
NP_4946A
Probable anaerobic dehydrogenase iron-sulfur-binding subunit.
  
 
 0.641
NP_4960A
Probable anaerobic dehydrogenase iron-sulfur-binding subunit.
  
 
 0.641
tupA
ABC-type transport system periplasmic substrate-binding protein (probable substrate tungstate).
 
   
 0.614
NP_5014A
VanZ family protein.
       0.537
samp1
Ubiquitin-like modifier protein SAMP1.
 
     0.537
NP_5012A
TIGR01210 family protein.
       0.476
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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