STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_11015Uncharacterized protein. (670 aa)    
Predicted Functional Partners:
PV05_11957
Uncharacterized protein.
  
 0.979
PV05_03654
Uncharacterized protein.
   
 0.969
PV05_01118
Histone deacetylase RPD3.
   
 0.956
PV05_07064
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.956
PV05_04313
SET domain-containing protein.
    
 
 0.951
PV05_02055
Uncharacterized protein.
    
 0.912
PV05_09442
mRNA_triPase domain-containing protein.
   
 0.898
PV05_06538
F-box domain-containing protein.
   
 0.898
PV05_11055
Uncharacterized protein.
   
 0.898
PV05_01654
HORMA domain-containing protein.
   
 0.858
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.