Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV05_00182 | PV05_01734 | A0A0D2FIF1 | A0A0D2F3T4 | NUC153 domain-containing protein. | Uncharacterized protein. | 0.785 |
PV05_00182 | PV05_04487 | A0A0D2FIF1 | A0A0D2EJZ7 | NUC153 domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.937 |
PV05_00182 | PV05_07775 | A0A0D2FIF1 | A0A0D2EBQ5 | NUC153 domain-containing protein. | Uncharacterized protein. | 0.869 |
PV05_00182 | PV05_09505 | A0A0D2FIF1 | A0A0D2CLH0 | NUC153 domain-containing protein. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.610 |
PV05_00182 | PV05_09856 | A0A0D2FIF1 | A0A0D2E8V7 | NUC153 domain-containing protein. | Uncharacterized protein. | 0.911 |
PV05_00182 | PV05_10930 | A0A0D2FIF1 | A0A0D2EMY6 | NUC153 domain-containing protein. | RRM domain-containing protein. | 0.898 |
PV05_01734 | PV05_00182 | A0A0D2F3T4 | A0A0D2FIF1 | Uncharacterized protein. | NUC153 domain-containing protein. | 0.785 |
PV05_01734 | PV05_04487 | A0A0D2F3T4 | A0A0D2EJZ7 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.931 |
PV05_01734 | PV05_07775 | A0A0D2F3T4 | A0A0D2EBQ5 | Uncharacterized protein. | Uncharacterized protein. | 0.758 |
PV05_01734 | PV05_09505 | A0A0D2F3T4 | A0A0D2CLH0 | Uncharacterized protein. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.514 |
PV05_01734 | PV05_09856 | A0A0D2F3T4 | A0A0D2E8V7 | Uncharacterized protein. | Uncharacterized protein. | 0.773 |
PV05_01734 | PV05_10930 | A0A0D2F3T4 | A0A0D2EMY6 | Uncharacterized protein. | RRM domain-containing protein. | 0.742 |
PV05_03892 | PV05_09505 | A0A0D2EUQ8 | A0A0D2CLH0 | HECT domain-containing protein. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.618 |
PV05_03991 | PV05_05322 | A0A0D2EV45 | A0A0D2D2Q1 | Uncharacterized protein. | Actin, gamma. | 0.963 |
PV05_03991 | PV05_09505 | A0A0D2EV45 | A0A0D2CLH0 | Uncharacterized protein. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.592 |
PV05_04463 | PV05_04487 | A0A0D2F6X2 | A0A0D2EJZ7 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.606 |
PV05_04463 | PV05_07775 | A0A0D2F6X2 | A0A0D2EBQ5 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Uncharacterized protein. | 0.504 |
PV05_04463 | PV05_09505 | A0A0D2F6X2 | A0A0D2CLH0 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. | 0.602 |
PV05_04463 | PV05_09856 | A0A0D2F6X2 | A0A0D2E8V7 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Uncharacterized protein. | 0.562 |
PV05_04463 | PV05_10930 | A0A0D2F6X2 | A0A0D2EMY6 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | RRM domain-containing protein. | 0.405 |
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