Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV05_00686 | PV05_04254 | A0A0D2C6G9 | A0A0D2EJG2 | Uncharacterized protein. | TFIIB-type domain-containing protein. | 0.969 |
PV05_00686 | PV05_07452 | A0A0D2C6G9 | A0A0D2BRN4 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
PV05_00686 | PV05_09095 | A0A0D2C6G9 | A0A0D2EG05 | Uncharacterized protein. | TATA-box-binding protein, variant. | 0.970 |
PV05_00686 | PV05_09905 | A0A0D2C6G9 | A0A0D2CMR0 | Uncharacterized protein. | Uncharacterized protein. | 0.899 |
PV05_00686 | PV05_11161 | A0A0D2C6G9 | A0A0D2CI61 | Uncharacterized protein. | BTB domain-containing protein. | 0.929 |
PV05_00688 | PV05_04254 | A0A0D2FK12 | A0A0D2EJG2 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. | TFIIB-type domain-containing protein. | 0.972 |
PV05_00688 | PV05_07452 | A0A0D2FK12 | A0A0D2BRN4 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. | Uncharacterized protein. | 0.997 |
PV05_00688 | PV05_09095 | A0A0D2FK12 | A0A0D2EG05 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. | TATA-box-binding protein, variant. | 0.994 |
PV05_00688 | PV05_09905 | A0A0D2FK12 | A0A0D2CMR0 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. | Uncharacterized protein. | 0.899 |
PV05_00688 | PV05_11161 | A0A0D2FK12 | A0A0D2CI61 | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. | BTB domain-containing protein. | 0.929 |
PV05_01653 | PV05_04254 | A0A0D2DGY3 | A0A0D2EJG2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TFIIB-type domain-containing protein. | 0.497 |
PV05_01653 | PV05_08820 | A0A0D2DGY3 | A0A0D2BL33 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Ada_Zn_binding domain-containing protein. | 0.659 |
PV05_01653 | PV05_09095 | A0A0D2DGY3 | A0A0D2EG05 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box-binding protein, variant. | 0.938 |
PV05_01653 | PV05_09110 | A0A0D2DGY3 | A0A0D2EG18 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
PV05_01653 | PV05_09905 | A0A0D2DGY3 | A0A0D2CMR0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.766 |
PV05_01653 | PV05_11161 | A0A0D2DGY3 | A0A0D2CI61 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | BTB domain-containing protein. | 0.890 |
PV05_01653 | PV05_11944 | A0A0D2DGY3 | A0A0D2E4J0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SANT domain-containing protein. | 0.982 |
PV05_04254 | PV05_00686 | A0A0D2EJG2 | A0A0D2C6G9 | TFIIB-type domain-containing protein. | Uncharacterized protein. | 0.969 |
PV05_04254 | PV05_00688 | A0A0D2EJG2 | A0A0D2FK12 | TFIIB-type domain-containing protein. | Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. | 0.972 |
PV05_04254 | PV05_01653 | A0A0D2EJG2 | A0A0D2DGY3 | TFIIB-type domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |
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