STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_08449Aminotran_5 domain-containing protein. (535 aa)    
Predicted Functional Partners:
PV05_05440
TPR_REGION domain-containing protein.
    
 0.959
PV05_02395
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.940
PV05_11540
Aminotran_1_2 domain-containing protein.
  
 0.915
PV05_08097
Phosphoserine phosphatase SerB.
   
 0.904
PV05_04430
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 
 0.901
PV05_06109
Malate synthase; Belongs to the malate synthase family.
  
 
 0.901
PV05_05896
Phosphoserine transaminase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
 0.898
PV05_11269
Tryptophan synthase.
  
 
 0.892
PV05_06029
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.888
PV05_01662
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.888
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.