Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | PV05_00579 | A0A0D2BDM0 | A0A0D2EX79 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.997 |
ERB1 | PV05_02197 | A0A0D2BDM0 | A0A0D2EPW2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.996 |
ERB1 | PV05_04487 | A0A0D2BDM0 | A0A0D2EJZ7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
ERB1 | PV05_06342 | A0A0D2BDM0 | A0A0D2EH72 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CP-type G domain-containing protein. | 0.998 |
ERB1 | PV05_07131 | A0A0D2BDM0 | A0A0D2EJC0 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.996 |
ERB1 | PV05_08322 | A0A0D2BDM0 | A0A0D2CRS2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CPL domain-containing protein. | 0.876 |
ERB1 | PV05_09052 | A0A0D2BDM0 | A0A0D2EFV4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RRM domain-containing protein. | 0.986 |
ERB1 | PV05_09066 | A0A0D2BDM0 | A0A0D2CU00 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar protein 58. | 0.985 |
ERB1 | PV05_09132 | A0A0D2BDM0 | A0A0D2CU64 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.893 |
ERB1 | PV05_11385 | A0A0D2BDM0 | A0A0D2E4P2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.993 |
PV05_00579 | ERB1 | A0A0D2EX79 | A0A0D2BDM0 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
PV05_00579 | PV05_02197 | A0A0D2EX79 | A0A0D2EPW2 | Uncharacterized protein. | Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.995 |
PV05_00579 | PV05_04487 | A0A0D2EX79 | A0A0D2EJZ7 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
PV05_00579 | PV05_06342 | A0A0D2EX79 | A0A0D2EH72 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.999 |
PV05_00579 | PV05_07131 | A0A0D2EX79 | A0A0D2EJC0 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
PV05_00579 | PV05_08322 | A0A0D2EX79 | A0A0D2CRS2 | Uncharacterized protein. | CPL domain-containing protein. | 0.975 |
PV05_00579 | PV05_09052 | A0A0D2EX79 | A0A0D2EFV4 | Uncharacterized protein. | RRM domain-containing protein. | 0.996 |
PV05_00579 | PV05_09066 | A0A0D2EX79 | A0A0D2CU00 | Uncharacterized protein. | Nucleolar protein 58. | 0.968 |
PV05_00579 | PV05_09132 | A0A0D2EX79 | A0A0D2CU64 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.893 |
PV05_00579 | PV05_11385 | A0A0D2EX79 | A0A0D2E4P2 | Uncharacterized protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.987 |
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