STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_06809RF_PROK_I domain-containing protein. (192 aa)    
Predicted Functional Partners:
PV05_10599
Ribosomal protein S16.
  
 
 0.989
PV05_07148
Ribosomal protein L19.
  
 
 0.984
PV05_11715
Uncharacterized protein.
   
 
 0.982
PV05_00054
Ribosomal protein S6.
  
 
 0.981
PV05_11141
Ribosomal protein L7/L12.
  
 
 0.979
PV05_08327
Ribosomal protein L32.
  
 
 0.977
PV05_10092
RRF domain-containing protein.
  
 
 0.971
PV05_10226
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.971
PV05_02234
Ribosomal protein L27.
  
 
 0.970
PV05_02253
Uncharacterized protein.
  
 
 0.970
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.