Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV05_01092 | PV05_04868 | A0A0D2EYV2 | A0A0D2F814 | Uncharacterized protein. | Uncharacterized protein. | 0.463 |
PV05_01092 | PV05_07410 | A0A0D2EYV2 | A0A0D2CY81 | Uncharacterized protein. | Uncharacterized protein. | 0.511 |
PV05_01092 | PV05_07932 | A0A0D2EYV2 | A0A0D2CQL6 | Uncharacterized protein. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.963 |
PV05_01362 | PV05_01441 | A0A0D2EZU1 | A0A0D2F036 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.410 |
PV05_01362 | PV05_04868 | A0A0D2EZU1 | A0A0D2F814 | Uncharacterized protein. | Uncharacterized protein. | 0.431 |
PV05_01362 | PV05_05228 | A0A0D2EZU1 | A0A0D2BVT1 | Uncharacterized protein. | Uncharacterized protein. | 0.410 |
PV05_01362 | PV05_07410 | A0A0D2EZU1 | A0A0D2CY81 | Uncharacterized protein. | Uncharacterized protein. | 0.505 |
PV05_01362 | PV05_07919 | A0A0D2EZU1 | A0A0D2EA79 | Uncharacterized protein. | BZIP domain-containing protein. | 0.424 |
PV05_01362 | PV05_07932 | A0A0D2EZU1 | A0A0D2CQL6 | Uncharacterized protein. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.434 |
PV05_01441 | PV05_01362 | A0A0D2F036 | A0A0D2EZU1 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.410 |
PV05_01441 | PV05_01974 | A0A0D2F036 | A0A0D2CA95 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.501 |
PV05_01441 | PV05_04868 | A0A0D2F036 | A0A0D2F814 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.518 |
PV05_01441 | PV05_07410 | A0A0D2F036 | A0A0D2CY81 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.488 |
PV05_01441 | PV05_07517 | A0A0D2F036 | A0A0D2BRV1 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.471 |
PV05_01441 | PV05_07919 | A0A0D2F036 | A0A0D2EA79 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | BZIP domain-containing protein. | 0.502 |
PV05_01441 | PV05_10075 | A0A0D2F036 | A0A0D2CN66 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.431 |
PV05_01974 | PV05_01441 | A0A0D2CA95 | A0A0D2F036 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.501 |
PV05_01974 | PV05_04868 | A0A0D2CA95 | A0A0D2F814 | Uncharacterized protein. | Uncharacterized protein. | 0.479 |
PV05_01974 | PV05_05228 | A0A0D2CA95 | A0A0D2BVT1 | Uncharacterized protein. | Uncharacterized protein. | 0.413 |
PV05_01974 | PV05_07410 | A0A0D2CA95 | A0A0D2CY81 | Uncharacterized protein. | Uncharacterized protein. | 0.539 |
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