STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_10684Uncharacterized protein; Belongs to the DEAD box helicase family. (528 aa)    
Predicted Functional Partners:
PV05_09218
Sas10 domain-containing protein.
   
 0.999
PV05_03539
WD_REPEATS_REGION domain-containing protein.
   
 0.995
PV05_10248
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 
 0.993
PV05_07003
Uncharacterized protein.
  
0.993
PV05_00247
Uncharacterized protein.
   
 0.992
PV05_11394
Uncharacterized protein.
   
 0.992
PV05_01178
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.992
PV05_05217
Ribosomal RNA small subunit methyltransferase NEP1.
   
 0.992
PV05_02845
CBF domain-containing protein.
   
 0.991
PV05_05694
Uncharacterized protein.
   
 0.990
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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