Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV05_00799 | PV05_01328 | A0A0D2DE77 | A0A0D2C8A0 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | 0.923 |
PV05_00799 | PV05_02363 | A0A0D2DE77 | A0A0D2FCJ5 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.670 |
PV05_00799 | PV05_03769 | A0A0D2DE77 | A0A0D2EX33 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Guanine nucleotide-binding protein subunit beta-like protein. | 0.595 |
PV05_00799 | PV05_05970 | A0A0D2DE77 | A0A0D2ERP2 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.426 |
PV05_00799 | PV05_09856 | A0A0D2DE77 | A0A0D2E8V7 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.465 |
PV05_00799 | PV05_10967 | A0A0D2DE77 | A0A0D2E1E2 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.657 |
PV05_00799 | PV05_11003 | A0A0D2DE77 | A0A0D2E3F7 | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | Uncharacterized protein. | 0.511 |
PV05_01328 | PV05_00799 | A0A0D2C8A0 | A0A0D2DE77 | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.923 |
PV05_01328 | PV05_09856 | A0A0D2C8A0 | A0A0D2E8V7 | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.593 |
PV05_01328 | PV05_10967 | A0A0D2C8A0 | A0A0D2E1E2 | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.564 |
PV05_01328 | PV05_11003 | A0A0D2C8A0 | A0A0D2E3F7 | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.535 |
PV05_02363 | PV05_00799 | A0A0D2FCJ5 | A0A0D2DE77 | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.670 |
PV05_02363 | PV05_03769 | A0A0D2FCJ5 | A0A0D2EX33 | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Guanine nucleotide-binding protein subunit beta-like protein. | 0.901 |
PV05_02363 | PV05_05970 | A0A0D2FCJ5 | A0A0D2ERP2 | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Uncharacterized protein. | 0.961 |
PV05_02363 | PV05_09856 | A0A0D2FCJ5 | A0A0D2E8V7 | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Uncharacterized protein. | 0.948 |
PV05_02363 | PV05_10406 | A0A0D2FCJ5 | A0A0D2BHG3 | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family. | 0.848 |
PV05_02363 | PV05_10967 | A0A0D2FCJ5 | A0A0D2E1E2 | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Uncharacterized protein. | 0.947 |
PV05_02363 | PV05_11003 | A0A0D2FCJ5 | A0A0D2E3F7 | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Uncharacterized protein. | 0.402 |
PV05_03769 | PV05_00799 | A0A0D2EX33 | A0A0D2DE77 | Guanine nucleotide-binding protein subunit beta-like protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.595 |
PV05_03769 | PV05_02363 | A0A0D2EX33 | A0A0D2FCJ5 | Guanine nucleotide-binding protein subunit beta-like protein. | Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.901 |
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