STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_11003Uncharacterized protein. (1031 aa)    
Predicted Functional Partners:
PV05_05970
Uncharacterized protein.
   
   0.638
PV05_03769
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.564
PV05_01328
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
   
 
 0.535
PV05_09856
Uncharacterized protein.
   
   0.514
PV05_00799
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.511
PV05_10406
Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
   
    0.491
PV05_10967
Uncharacterized protein.
   
   0.471
PV05_05994
SH3 domain-containing protein; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.
   
    0.432
PV05_10180
ThiF domain-containing protein.
    
 
 0.417
PV05_02363
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.402
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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