PV05_11718 protein (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PV05_11718

Uncharacterized protein. (794 aa)

Predicted Functional Partners:

PV05_10884

0.658

PV05_10913

0.593

PV05_03694

0.579

PV05_01858

0.579

PV05_06478

0.579

PV05_05979

0.579

PV05_09167

0.569

PV05_00584

0.565

PV05_02478

0.476

PV05_00675

0.476

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00584	PV05_09167	A0A0D2FJP1	A0A0D2CU89	Uncharacterized protein.	Uncharacterized protein.	0.814
PV05_00584	PV05_11718	A0A0D2FJP1	A0A0D2E3S3	Uncharacterized protein.	Uncharacterized protein.	0.565
PV05_00675	PV05_10884	A0A0D2F0L7	A0A0D2E346	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.999
PV05_00675	PV05_11718	A0A0D2F0L7	A0A0D2E3S3	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.476
PV05_01858	PV05_03694	A0A0D2C9V8	A0A0D2C310	t-SNARE coiled-coil homology domain-containing protein.	DNA_pol_E_B domain-containing protein.	0.851
PV05_01858	PV05_05979	A0A0D2C9V8	A0A0D2FBI8	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.851
PV05_01858	PV05_06478	A0A0D2C9V8	A0A0D2CVH7	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.851
PV05_01858	PV05_09167	A0A0D2C9V8	A0A0D2CU89	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.980
PV05_01858	PV05_10913	A0A0D2C9V8	A0A0D2BAF1	t-SNARE coiled-coil homology domain-containing protein.	Ribosome-interacting GTPase 1.	0.851
PV05_01858	PV05_11718	A0A0D2C9V8	A0A0D2E3S3	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.579
PV05_02478	PV05_10884	A0A0D2D6H2	A0A0D2E346	Metallophos domain-containing protein.	Uncharacterized protein.	0.983
PV05_02478	PV05_11718	A0A0D2D6H2	A0A0D2E3S3	Metallophos domain-containing protein.	Uncharacterized protein.	0.476
PV05_03694	PV05_01858	A0A0D2C310	A0A0D2C9V8	DNA_pol_E_B domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.851
PV05_03694	PV05_05979	A0A0D2C310	A0A0D2FBI8	DNA_pol_E_B domain-containing protein.	Uncharacterized protein.	0.851
PV05_03694	PV05_06478	A0A0D2C310	A0A0D2CVH7	DNA_pol_E_B domain-containing protein.	Uncharacterized protein.	0.851
PV05_03694	PV05_10913	A0A0D2C310	A0A0D2BAF1	DNA_pol_E_B domain-containing protein.	Ribosome-interacting GTPase 1.	0.851
PV05_03694	PV05_11718	A0A0D2C310	A0A0D2E3S3	DNA_pol_E_B domain-containing protein.	Uncharacterized protein.	0.579
PV05_05979	PV05_01858	A0A0D2FBI8	A0A0D2C9V8	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.851
PV05_05979	PV05_03694	A0A0D2FBI8	A0A0D2C310	Uncharacterized protein.	DNA_pol_E_B domain-containing protein.	0.851
PV05_05979	PV05_10913	A0A0D2FBI8	A0A0D2BAF1	Uncharacterized protein.	Ribosome-interacting GTPase 1.	0.851