Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LSM4 | PV05_00175 | A0A0D2EUF0 | A0A0D2C4V4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | PAT1 domain-containing protein. | 0.999 |
LSM4 | PV05_00547 | A0A0D2EUF0 | A0A0D2F045 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Nudix hydrolase domain-containing protein. | 0.850 |
LSM4 | PV05_01328 | A0A0D2EUF0 | A0A0D2C8A0 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | 0.957 |
LSM4 | PV05_01443 | A0A0D2EUF0 | A0A0D2F2X3 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NTP_transf_9 domain-containing protein. | 0.819 |
LSM4 | PV05_03462 | A0A0D2EUF0 | A0A0D2FFW6 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.850 |
LSM4 | PV05_08748 | A0A0D2EUF0 | A0A0D2BKW5 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NTP_transf_9 domain-containing protein. | 0.819 |
LSM4 | PV05_10171 | A0A0D2EUF0 | A0A0D2E7N7 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.895 |
LSM4 | PV05_10598 | A0A0D2EUF0 | A0A0D2EB80 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.859 |
PV05_00175 | LSM4 | A0A0D2C4V4 | A0A0D2EUF0 | PAT1 domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
PV05_00175 | PV05_00547 | A0A0D2C4V4 | A0A0D2F045 | PAT1 domain-containing protein. | Nudix hydrolase domain-containing protein. | 0.971 |
PV05_00175 | PV05_01328 | A0A0D2C4V4 | A0A0D2C8A0 | PAT1 domain-containing protein. | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | 0.996 |
PV05_00175 | PV05_01443 | A0A0D2C4V4 | A0A0D2F2X3 | PAT1 domain-containing protein. | NTP_transf_9 domain-containing protein. | 0.930 |
PV05_00175 | PV05_03462 | A0A0D2C4V4 | A0A0D2FFW6 | PAT1 domain-containing protein. | Uncharacterized protein. | 0.971 |
PV05_00175 | PV05_08748 | A0A0D2C4V4 | A0A0D2BKW5 | PAT1 domain-containing protein. | NTP_transf_9 domain-containing protein. | 0.930 |
PV05_00175 | PV05_10171 | A0A0D2C4V4 | A0A0D2E7N7 | PAT1 domain-containing protein. | Uncharacterized protein. | 0.981 |
PV05_00175 | PV05_10598 | A0A0D2C4V4 | A0A0D2EB80 | PAT1 domain-containing protein. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.935 |
PV05_00547 | LSM4 | A0A0D2F045 | A0A0D2EUF0 | Nudix hydrolase domain-containing protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.850 |
PV05_00547 | PV05_00175 | A0A0D2F045 | A0A0D2C4V4 | Nudix hydrolase domain-containing protein. | PAT1 domain-containing protein. | 0.971 |
PV05_00547 | PV05_01328 | A0A0D2F045 | A0A0D2C8A0 | Nudix hydrolase domain-containing protein. | ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family. | 0.920 |
PV05_00547 | PV05_10171 | A0A0D2F045 | A0A0D2E7N7 | Nudix hydrolase domain-containing protein. | Uncharacterized protein. | 0.972 |
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