STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_06788Btz domain-containing protein. (676 aa)    
Predicted Functional Partners:
PV05_09812
Calponin-homology (CH) domain-containing protein.
  
   0.505
PV05_06787
Uncharacterized protein.
 
 
  0.471
PV05_00426
Uncharacterized protein.
  
 
  0.469
PV05_07787
Uncharacterized protein.
    
  0.468
PV05_05557
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
  
 
  0.447
PV05_11500
Uncharacterized protein.
  
 
  0.443
PV05_07910
Uncharacterized protein.
  
 
  0.435
PV05_11309
MRG domain-containing protein.
    
  0.434
PV05_10814
DBF4-type domain-containing protein.
  
 
  0.432
PV05_05794
C2H2-type domain-containing protein.
  
 
  0.424
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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