Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV05_00264 | PV05_01985 | A0A0D2C570 | A0A0D2F1U6 | DNA polymerase. | Uncharacterized protein. | 0.999 |
PV05_00264 | PV05_06077 | A0A0D2C570 | A0A0D2BYQ9 | DNA polymerase. | ERCC4 domain-containing protein. | 0.697 |
PV05_00264 | PV05_06855 | A0A0D2C570 | A0A0D2EIT0 | DNA polymerase. | N-acetyltransferase domain-containing protein. | 0.617 |
PV05_00264 | PV05_08658 | A0A0D2C570 | A0A0D2EZB4 | DNA polymerase. | ERCC4 domain-containing protein. | 0.792 |
PV05_01001 | PV05_04993 | A0A0D2F1I5 | A0A0D2BV17 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein G. | 0.999 |
PV05_01001 | PV05_06855 | A0A0D2F1I5 | A0A0D2EIT0 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | N-acetyltransferase domain-containing protein. | 0.565 |
PV05_01001 | PV05_07926 | A0A0D2F1I5 | A0A0D2BIS3 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Uncharacterized protein. | 0.973 |
PV05_01001 | PV05_11431 | A0A0D2F1I5 | A0A0D2EPP5 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
PV05_01985 | PV05_00264 | A0A0D2F1U6 | A0A0D2C570 | Uncharacterized protein. | DNA polymerase. | 0.999 |
PV05_01985 | PV05_06855 | A0A0D2F1U6 | A0A0D2EIT0 | Uncharacterized protein. | N-acetyltransferase domain-containing protein. | 0.625 |
PV05_04993 | PV05_01001 | A0A0D2BV17 | A0A0D2F1I5 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PV05_04993 | PV05_06855 | A0A0D2BV17 | A0A0D2EIT0 | Small nuclear ribonucleoprotein G. | N-acetyltransferase domain-containing protein. | 0.533 |
PV05_04993 | PV05_07926 | A0A0D2BV17 | A0A0D2BIS3 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.967 |
PV05_04993 | PV05_11431 | A0A0D2BV17 | A0A0D2EPP5 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
PV05_06077 | PV05_00264 | A0A0D2BYQ9 | A0A0D2C570 | ERCC4 domain-containing protein. | DNA polymerase. | 0.697 |
PV05_06077 | PV05_06855 | A0A0D2BYQ9 | A0A0D2EIT0 | ERCC4 domain-containing protein. | N-acetyltransferase domain-containing protein. | 0.554 |
PV05_06077 | PV05_08658 | A0A0D2BYQ9 | A0A0D2EZB4 | ERCC4 domain-containing protein. | ERCC4 domain-containing protein. | 0.968 |
PV05_06288 | PV05_06855 | A0A0D2CUU7 | A0A0D2EIT0 | WD_REPEATS_REGION domain-containing protein. | N-acetyltransferase domain-containing protein. | 0.571 |
PV05_06855 | PV05_00264 | A0A0D2EIT0 | A0A0D2C570 | N-acetyltransferase domain-containing protein. | DNA polymerase. | 0.617 |
PV05_06855 | PV05_01001 | A0A0D2EIT0 | A0A0D2F1I5 | N-acetyltransferase domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.565 |
page 1 of 3