STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_10833USP domain-containing protein; Belongs to the peptidase C19 family. (2539 aa)    
Predicted Functional Partners:
PV05_05079
Polyubiquitin.
   
 0.946
PV05_03892
HECT domain-containing protein.
   
 
 0.917
PV05_09061
BZIP domain-containing protein.
    
 0.896
PV05_09373
Ubiquitin-40S ribosomal protein S27a.
    
 0.896
PV05_06775
Uncharacterized protein.
   
 
 0.872
PV05_02781
Uncharacterized protein.
    
  0.826
PV05_03018
RRN7-type domain-containing protein.
    
  0.826
PV05_11605
Ubiquitin-60S ribosomal protein L40.
    
  0.826
PV05_00728
Uncharacterized protein.
    
 0.802
PV05_00634
Ubiquitin-like domain-containing protein.
   
 0.798
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.