STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_09576BTP domain-containing protein. (236 aa)    
Predicted Functional Partners:
PV05_01652
TAF8_C domain-containing protein.
    
 
 0.950
PV05_09577
TAFII55_N domain-containing protein.
    
 
 0.942
PV05_00944
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
   0.941
PV05_04258
TFIID_20kDa domain-containing protein.
    
   0.941
PV05_04994
Uncharacterized protein.
    
   0.941
PV05_09095
TATA-box-binding protein, variant.
    
   0.941
PV05_02471
Uncharacterized protein.
    
   0.941
PV05_03752
DUF3591 domain-containing protein.
    
   0.941
PV05_06285
TAF domain-containing protein.
    
   0.941
PV05_11161
BTB domain-containing protein.
    
   0.886
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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