STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_02491Uncharacterized protein. (574 aa)    
Predicted Functional Partners:
PV05_08378
Uncharacterized protein.
   
 
 0.768
PV05_04585
Uncharacterized protein.
   
 
 0.685
PV05_06420
Uncharacterized protein.
   
 
 0.685
PV05_02875
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
  0.561
PV05_03838
Uncharacterized protein.
   
 
 0.536
PV05_05823
Protein MAK16; Belongs to the MAK16 family.
   
   0.517
PV05_06186
Uncharacterized protein.
   
   0.516
PV05_11384
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
   0.507
PV05_10761
BZIP domain-containing protein.
   
 
 0.505
PV05_00824
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
 
 0.491
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.