STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_02665S10_plectin domain-containing protein. (163 aa)    
Predicted Functional Partners:
PV05_04503
40S ribosomal protein S17.
   
 0.999
PV05_05665
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.999
PV05_11791
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
PV05_10029
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
PV05_01592
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
PV05_01774
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
PV05_10882
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
PV05_09319
40S ribosomal protein S20.
   
 0.999
PV05_09341
40S ribosomal protein S19.
   
 0.999
PV05_05157
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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