STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_10176RRM domain-containing protein. (337 aa)    
Predicted Functional Partners:
PV05_06879
FHA domain-containing protein.
   
 0.996
PV05_05862
Uncharacterized protein.
   
 0.996
PV05_11187
PHD finger-like domain-containing protein 5B.
    
 
 0.987
PV05_01666
SF3b1 domain-containing protein.
    
 
 0.987
PV05_07094
Pre-mRNA-splicing factor rse1.
    
 
 0.984
PV05_09189
PSP domain-containing protein.
    
 
 0.984
PV05_06006
Uncharacterized protein.
    
 
 0.982
PV05_04519
Uncharacterized protein.
    
 
 0.981
PV05_00134
Uncharacterized protein.
    
   0.978
PV05_10381
Uncharacterized protein.
    
   0.962
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.