STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_01041WD_REPEATS_REGION domain-containing protein. (508 aa)    
Predicted Functional Partners:
PV05_09856
Uncharacterized protein.
   
   0.927
PV05_07131
Uncharacterized protein.
   
 
 0.908
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.906
PV05_05688
Uncharacterized protein.
   
 
 0.899
PV05_01459
RNA helicase.
   
   0.886
PV05_02679
Uncharacterized protein.
   
 
 0.881
PV05_09958
WD_REPEATS_REGION domain-containing protein.
  
  
 0.875
PV05_03762
Uncharacterized protein.
   
 
 0.875
PV05_00814
WD_REPEATS_REGION domain-containing protein.
   
  
 0.874
PV05_09962
Uncharacterized protein.
  
  
 0.870
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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