STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_00251DNA ligase. (1028 aa)    
Predicted Functional Partners:
PV05_10348
SAP domain-containing protein.
  
 0.988
PV05_07733
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
   
 0.987
PV05_08324
Uncharacterized protein.
   
 0.972
PV05_04584
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.897
PV05_01567
HRDC domain-containing protein.
    
 0.897
PV05_03469
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.896
PV05_03470
Vezatin domain-containing protein.
   
 0.896
PV05_08397
POLXc domain-containing protein.
  
 0.877
PV05_08124
Polynucleotide kinase 3'-phosphatase.
   
 0.866
PV05_11444
BRCT domain-containing protein.
  
 0.865
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.