Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV05_00634 | PV05_00728 | A0A0D2EXF3 | A0A0D2C6N6 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.865 |
PV05_00634 | PV05_01283 | A0A0D2EXF3 | A0A0D2F2G7 | Ubiquitin-like domain-containing protein. | Histone H2A; Belongs to the histone H2A family. | 0.857 |
PV05_00634 | PV05_03640 | A0A0D2EXF3 | A0A0D2ETY1 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.873 |
PV05_00634 | PV05_08176 | A0A0D2EXF3 | A0A0D2BJE7 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.750 |
PV05_00634 | PV05_09061 | A0A0D2EXF3 | A0A0D2BLT8 | Ubiquitin-like domain-containing protein. | BZIP domain-containing protein. | 0.864 |
PV05_00634 | PV05_09169 | A0A0D2EXF3 | A0A0D2F0W1 | Ubiquitin-like domain-containing protein. | USP domain-containing protein. | 0.706 |
PV05_00634 | PV05_09373 | A0A0D2EXF3 | A0A0D2ERZ6 | Ubiquitin-like domain-containing protein. | Ubiquitin-40S ribosomal protein S27a. | 0.864 |
PV05_00634 | PV05_11201 | A0A0D2EXF3 | A0A0D2EP10 | Ubiquitin-like domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.857 |
PV05_00728 | PV05_00634 | A0A0D2C6N6 | A0A0D2EXF3 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.865 |
PV05_00728 | PV05_01283 | A0A0D2C6N6 | A0A0D2F2G7 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.866 |
PV05_00728 | PV05_03640 | A0A0D2C6N6 | A0A0D2ETY1 | Uncharacterized protein. | Uncharacterized protein. | 0.785 |
PV05_00728 | PV05_05079 | A0A0D2C6N6 | A0A0D2F8Q2 | Uncharacterized protein. | Polyubiquitin. | 0.864 |
PV05_00728 | PV05_06236 | A0A0D2C6N6 | A0A0D2F1H1 | Uncharacterized protein. | Uncharacterized protein. | 0.864 |
PV05_00728 | PV05_08176 | A0A0D2C6N6 | A0A0D2BJE7 | Uncharacterized protein. | Uncharacterized protein. | 0.751 |
PV05_00728 | PV05_09169 | A0A0D2C6N6 | A0A0D2F0W1 | Uncharacterized protein. | USP domain-containing protein. | 0.721 |
PV05_00728 | PV05_11201 | A0A0D2C6N6 | A0A0D2EP10 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.866 |
PV05_01283 | PV05_00634 | A0A0D2F2G7 | A0A0D2EXF3 | Histone H2A; Belongs to the histone H2A family. | Ubiquitin-like domain-containing protein. | 0.857 |
PV05_01283 | PV05_00728 | A0A0D2F2G7 | A0A0D2C6N6 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.866 |
PV05_01283 | PV05_03640 | A0A0D2F2G7 | A0A0D2ETY1 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.554 |
PV05_01283 | PV05_05079 | A0A0D2F2G7 | A0A0D2F8Q2 | Histone H2A; Belongs to the histone H2A family. | Polyubiquitin. | 0.976 |
page 1 of 5