PV05_00762 protein (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PV05_00762

Uncharacterized protein; Belongs to the cytochrome P450 family. (457 aa)

Predicted Functional Partners:

PV05_03829

0.745

PV05_00297

0.745

PV05_11269

0.739

PV05_03044

0.582

PV05_05250

0.580

PV05_04793

0.564

PV05_11422

0.561

PV05_01246

0.555

PV05_10437

0.550

PV05_11805

0.539

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00297	PV05_00762	A0A0D2DCR6	A0A0D2F0W8	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.745
PV05_00297	PV05_01246	A0A0D2DCR6	A0A0D2FLS3	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.483
PV05_00297	PV05_03044	A0A0D2DCR6	A0A0D2FEN1	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.753
PV05_00297	PV05_03829	A0A0D2DCR6	A0A0D2C3G8	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.956
PV05_00297	PV05_04793	A0A0D2DCR6	A0A0D2EN24	Uncharacterized protein.	Uncharacterized protein.	0.753
PV05_00297	PV05_05250	A0A0D2DCR6	A0A0D2EMG0	Uncharacterized protein.	Uncharacterized protein.	0.744
PV05_00297	PV05_10437	A0A0D2DCR6	A0A0D2BHJ4	Uncharacterized protein.	Uncharacterized protein.	0.753
PV05_00297	PV05_11269	A0A0D2DCR6	A0A0D2CID0	Uncharacterized protein.	Tryptophan synthase.	0.786
PV05_00297	PV05_11422	A0A0D2DCR6	A0A0D2E2N2	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.753
PV05_00297	PV05_11805	A0A0D2DCR6	A0A0D2CK26	Uncharacterized protein.	Uncharacterized protein.	0.744
PV05_00762	PV05_00297	A0A0D2F0W8	A0A0D2DCR6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.745
PV05_00762	PV05_01246	A0A0D2F0W8	A0A0D2FLS3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.555
PV05_00762	PV05_03044	A0A0D2F0W8	A0A0D2FEN1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.582
PV05_00762	PV05_03829	A0A0D2F0W8	A0A0D2C3G8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.745
PV05_00762	PV05_04793	A0A0D2F0W8	A0A0D2EN24	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.564
PV05_00762	PV05_05250	A0A0D2F0W8	A0A0D2EMG0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.580
PV05_00762	PV05_10437	A0A0D2F0W8	A0A0D2BHJ4	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.550
PV05_00762	PV05_11269	A0A0D2F0W8	A0A0D2CID0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Tryptophan synthase.	0.739
PV05_00762	PV05_11422	A0A0D2F0W8	A0A0D2E2N2	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.561
PV05_00762	PV05_11805	A0A0D2F0W8	A0A0D2CK26	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.539