STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV05_04982Rieske domain-containing protein. (464 aa)    
Predicted Functional Partners:
PV05_11269
Tryptophan synthase.
    
  0.737
PV05_07743
Uncharacterized protein.
 
 0.637
PV05_04430
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.567
PV05_09533
Uncharacterized protein.
  
 0.561
PV05_08348
Zn(2)-C6 fungal-type domain-containing protein.
  
 0.561
PV05_01102
DAO domain-containing protein.
  
 0.561
PV05_01043
DAO domain-containing protein.
  
 0.561
PV05_02225
DAO domain-containing protein.
  
 0.561
PV05_01687
DAO domain-containing protein.
  
 0.561
PV05_00027
Pyr_redox_2 domain-containing protein.
    
  0.541
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.