Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV05_00649 | PV05_01058 | A0A0D2FJX0 | A0A0D2C7G7 | Dihydroxyacetone kinase. | Chlorophyll synthesis pathway protein BchC. | 0.454 |
PV05_00649 | PV05_01574 | A0A0D2FJX0 | A0A0D2FN02 | Dihydroxyacetone kinase. | Aldo_ket_red domain-containing protein. | 0.548 |
PV05_00649 | PV05_02894 | A0A0D2FJX0 | A0A0D2C0W1 | Dihydroxyacetone kinase. | PKS_ER domain-containing protein. | 0.454 |
PV05_00649 | PV05_06778 | A0A0D2FJX0 | A0A0D2EG43 | Dihydroxyacetone kinase. | L-arabinitol 4-dehydrogenase. | 0.454 |
PV05_00649 | PV05_06935 | A0A0D2FJX0 | A0A0D2EIX2 | Dihydroxyacetone kinase. | Uncharacterized protein. | 0.454 |
PV05_01058 | PV05_00649 | A0A0D2C7G7 | A0A0D2FJX0 | Chlorophyll synthesis pathway protein BchC. | Dihydroxyacetone kinase. | 0.454 |
PV05_01058 | PV05_01574 | A0A0D2C7G7 | A0A0D2FN02 | Chlorophyll synthesis pathway protein BchC. | Aldo_ket_red domain-containing protein. | 0.526 |
PV05_01574 | PV05_00649 | A0A0D2FN02 | A0A0D2FJX0 | Aldo_ket_red domain-containing protein. | Dihydroxyacetone kinase. | 0.548 |
PV05_01574 | PV05_01058 | A0A0D2FN02 | A0A0D2C7G7 | Aldo_ket_red domain-containing protein. | Chlorophyll synthesis pathway protein BchC. | 0.526 |
PV05_01574 | PV05_02841 | A0A0D2FN02 | A0A0D2D7M8 | Aldo_ket_red domain-containing protein. | Glutamate-cysteine ligase. | 0.683 |
PV05_01574 | PV05_02894 | A0A0D2FN02 | A0A0D2C0W1 | Aldo_ket_red domain-containing protein. | PKS_ER domain-containing protein. | 0.526 |
PV05_01574 | PV05_04811 | A0A0D2FN02 | A0A0D2F7W3 | Aldo_ket_red domain-containing protein. | Uncharacterized protein. | 0.541 |
PV05_01574 | PV05_06778 | A0A0D2FN02 | A0A0D2EG43 | Aldo_ket_red domain-containing protein. | L-arabinitol 4-dehydrogenase. | 0.639 |
PV05_01574 | PV05_06935 | A0A0D2FN02 | A0A0D2EIX2 | Aldo_ket_red domain-containing protein. | Uncharacterized protein. | 0.638 |
PV05_01574 | PV05_07479 | A0A0D2FN02 | A0A0D2EKI0 | Aldo_ket_red domain-containing protein. | Uncharacterized protein. | 0.541 |
PV05_01574 | PV05_08115 | A0A0D2FN02 | A0A0D2BJ91 | Aldo_ket_red domain-containing protein. | Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.541 |
PV05_01574 | PV05_11269 | A0A0D2FN02 | A0A0D2CID0 | Aldo_ket_red domain-containing protein. | Tryptophan synthase. | 0.773 |
PV05_02841 | PV05_01574 | A0A0D2D7M8 | A0A0D2FN02 | Glutamate-cysteine ligase. | Aldo_ket_red domain-containing protein. | 0.683 |
PV05_02894 | PV05_00649 | A0A0D2C0W1 | A0A0D2FJX0 | PKS_ER domain-containing protein. | Dihydroxyacetone kinase. | 0.454 |
PV05_02894 | PV05_01574 | A0A0D2C0W1 | A0A0D2FN02 | PKS_ER domain-containing protein. | Aldo_ket_red domain-containing protein. | 0.526 |
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