STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RIB1Putative oxidoreductase C1F5.03c. (403 aa)    
Predicted Functional Partners:
A0A2I0RGU3
Tryptophan synthase.
    
  0.785
A0A2I0RW37
Pyr_redox_2 domain-containing protein.
   
 0.667
A0A2I0RWI5
Nitrite reductase [NAD(P)H].
   
 0.667
A0A2I0RY40
Apoptosis-inducing factor 2.
   
 0.667
A0A2I0S189
Apoptosis-inducing factor 1.
   
 0.667
A0A2I0RH50
DAO domain-containing protein.
  
 0.630
A0A2I0RP15
Dimethylglycine oxidase.
  
 0.630
A0A2I0S583
DAO domain-containing protein.
  
 0.630
A0A2I0S8F4
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.630
A0A2I0S9P7
DAO domain-containing protein.
  
 0.630
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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