STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RIY9Protein LTV1. (509 aa)    
Predicted Functional Partners:
A0A2I0RR79
Serine/threonine-protein kinase rio2.
   
 0.999
A0A2I0RXM4
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.999
A0A2I0S7S3
Ribosome biogenesis protein tsr1-like protein.
   
 0.999
A0A2I0S968
Uncharacterized protein.
   
 0.999
A0A2I0RWY3
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.998
A0A2I0S219
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.998
A0A2I0S7S7
Putative alpha-L-arabinofuranosidase C.
    
 0.997
A0A2I0S8V4
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.997
A0A2I0S0I1
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.996
A0A2I0RL58
40S ribosomal protein S20.
    
 0.995
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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