STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RKF2Endoribonuclease ysh1. (852 aa)    
Predicted Functional Partners:
A0A2I0RPZ4
Polyadenylation factor subunit 2.
   
 0.999
A0A2I0S0F7
mRNA cleavage and polyadenylation specificity factor complex subunit pta1.
   
 0.999
A0A2I0S3V1
Protein cft1.
   
 0.999
A0A2I0S869
Cleavage and polyadenylation specificity factor subunit 2.
   
0.999
A0A2I0RKL4
Zinc finger CCCH domain-containing protein 45.
   
 0.998
A0A2I0RNS7
Pre-mRNA polyadenylation factor fip1.
    
 0.998
A0A2I0RS75
mRNA 3'-end-processing protein YTH1.
   
 0.998
A0A2I0S847
Putative RING finger protein P8B7.15c.
    
 0.997
A0A2I0RZW3
WD repeat-containing protein 82.
   
 0.993
A0A2I0RQM4
RNA polymerase II subunit A C-terminal domain phosphatase ssu-72.
   
 0.991
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.