STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RKL4Zinc finger CCCH domain-containing protein 45. (566 aa)    
Predicted Functional Partners:
A0A2I0RKF2
Endoribonuclease ysh1.
   
 0.998
A0A2I0RNS7
Pre-mRNA polyadenylation factor fip1.
    
 0.998
A0A2I0S1D3
Protein artemis.
    
 0.998
A0A2I0S3V1
Protein cft1.
    
 0.998
A0A2I0S869
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.998
A0A2I0S8W4
DNA cross-link repair protein pso2/snm1.
    
 0.998
A0A2I0RIH1
CID domain-containing protein.
   
 0.997
A0A2I0RIT5
mRNA 3'-end-processing protein rna-14.
    
 0.997
A0A2I0RQ59
Pre-mRNA cleavage factor Im 25 kDa subunit 2.
    
 0.997
A0A2I0RR30
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.997
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.