STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RMT3Transcription factor tau subunit sfc1. (600 aa)    
Predicted Functional Partners:
A0A2I0S2T5
Transcription factor tau subunit sfc4.
   
 0.999
A0A2I0RR02
B-block_TFIIIC domain-containing protein.
    
 0.985
A0A2I0RLG5
Transcription factor tau subunit sfc6.
    
 0.978
A0A2I0S2A6
Transcription factor IIIB 60 kDa subunit.
    
 0.923
A0A2I0RPL0
Uncharacterized protein.
    
 
 0.914
A0A2I0RVK7
Transcription factor TFIIIB component B.
    
 0.866
A0A2I0SAJ6
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.830
A0A2I0S470
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.809
A0A2I0S9R8
DNA-directed RNA polymerase III subunit rpc4.
     
 0.794
A0A2I0S249
TATA-box-binding protein.
    
 0.783
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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