STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RN72Zinc finger protein PLAG1. (325 aa)    
Predicted Functional Partners:
A0A2I0RWK1
Nitrate reductase [NADPH].
    
 0.762
A0A2I0S2T5
Transcription factor tau subunit sfc4.
    
 0.610
A0A2I0RJ83
Chromatin remodeling factor mit1.
    
 0.596
A0A2I0S7P2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.593
A0A2I0RT44
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
  0.587
A0A2I0SAJ6
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.586
A0A2I0RMT3
Transcription factor tau subunit sfc1.
    
 0.582
A0A2I0RHJ4
Transcription initiation factor TFIID subunit 6.
    
  0.576
A0A2I0RR02
B-block_TFIIIC domain-containing protein.
    
 0.574
A0A2I0S159
Transcription initiation factor IIA large subunit.
    
  0.574
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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