Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A2I0RN02 | A0A2I0RQH8 | A0A2I0RN02 | A0A2I0RQH8 | U3 small nucleolar RNA-associated protein 18. | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | 0.935 |
A0A2I0RN02 | A0A2I0RVC9 | A0A2I0RN02 | A0A2I0RVC9 | U3 small nucleolar RNA-associated protein 18. | ATP-dependent RNA helicase rok1. | 0.811 |
A0A2I0RN02 | A0A2I0RXE2 | A0A2I0RN02 | A0A2I0RXE2 | U3 small nucleolar RNA-associated protein 18. | Nucleolar protein 12. | 0.410 |
A0A2I0RN02 | A0A2I0S425 | A0A2I0RN02 | A0A2I0S425 | U3 small nucleolar RNA-associated protein 18. | Putative nucleolar complex protein 14. | 0.998 |
A0A2I0RN02 | A0A2I0S4F5 | A0A2I0RN02 | A0A2I0S4F5 | U3 small nucleolar RNA-associated protein 18. | Putative NOC2 family protein. | 0.879 |
A0A2I0RN02 | A0A2I0S5D4 | A0A2I0RN02 | A0A2I0S5D4 | U3 small nucleolar RNA-associated protein 18. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.875 |
A0A2I0RN02 | A0A2I0S9C5 | A0A2I0RN02 | A0A2I0S9C5 | U3 small nucleolar RNA-associated protein 18. | rRNA biogenesis protein rrp5. | 0.992 |
A0A2I0RN02 | ERB1 | A0A2I0RN02 | A0A2I0RX83 | U3 small nucleolar RNA-associated protein 18. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.948 |
A0A2I0RN02 | NOP7 | A0A2I0RN02 | A0A2I0RXJ9 | U3 small nucleolar RNA-associated protein 18. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.676 |
A0A2I0RN02 | SPB1 | A0A2I0RN02 | A0A2I0S993 | U3 small nucleolar RNA-associated protein 18. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.840 |
A0A2I0RQH8 | A0A2I0RN02 | A0A2I0RQH8 | A0A2I0RN02 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | U3 small nucleolar RNA-associated protein 18. | 0.935 |
A0A2I0RQH8 | A0A2I0RVC9 | A0A2I0RQH8 | A0A2I0RVC9 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase rok1. | 0.959 |
A0A2I0RQH8 | A0A2I0RXE2 | A0A2I0RQH8 | A0A2I0RXE2 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | Nucleolar protein 12. | 0.928 |
A0A2I0RQH8 | A0A2I0S425 | A0A2I0RQH8 | A0A2I0S425 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | Putative nucleolar complex protein 14. | 0.948 |
A0A2I0RQH8 | A0A2I0S4F5 | A0A2I0RQH8 | A0A2I0S4F5 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | Putative NOC2 family protein. | 0.938 |
A0A2I0RQH8 | A0A2I0S5D4 | A0A2I0RQH8 | A0A2I0S5D4 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.922 |
A0A2I0RQH8 | A0A2I0S9C5 | A0A2I0RQH8 | A0A2I0S9C5 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | rRNA biogenesis protein rrp5. | 0.953 |
A0A2I0RQH8 | ERB1 | A0A2I0RQH8 | A0A2I0RX83 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.936 |
A0A2I0RQH8 | NOP7 | A0A2I0RQH8 | A0A2I0RXJ9 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.947 |
A0A2I0RQH8 | SPB1 | A0A2I0RQH8 | A0A2I0S993 | ATP-dependent RNA helicase dbp7; Belongs to the DEAD box helicase family. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.930 |
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