STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RTE6Uncharacterized protein. (353 aa)    
Predicted Functional Partners:
A0A2I0RMF8
BZIP domain-containing protein.
    
  0.893
A0A2I0RI10
Ubiquitin-40S ribosomal protein S27a.
    
  0.737
A0A2I0RN13
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.689
A0A2I0S043
Ubiquitin-conjugating enzyme E2 16.
    
  0.689
A0A2I0RWM3
annotation not available
    
  0.685
A0A2I0RPB2
Protein kinase C-like.
    
 0.671
A0A2I0RJ21
Uncharacterized protein.
    
 0.666
A0A2I0RZM3
Ubiquitin-like domain-containing protein.
    
 0.666
A0A2I0RJZ7
Ubiquitin-40S ribosomal protein S27a.
    
  0.649
A0A2I0RQJ4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.633
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.