STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0RZG654S ribosomal protein L1, mitochondrial. (331 aa)    
Predicted Functional Partners:
A0A2I0RTH6
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
 
 0.544
A0A2I0RT93
Putative 54S ribosomal protein L7, mitochondrial.
  
 
   0.537
A0A2I0S9B0
Putative uracil phosphoribosyltransferase urg2.
   
 
  0.514
A0A2I0RQ64
Putative purine nucleoside phosphorylase.
   
 
  0.510
A0A2I0RQ12
Aromatic-L-amino-acid decarboxylase.
     
 0.508
A0A2I0RLZ8
Aspartate aminotransferase.
     
 0.507
A0A2I0RK54
L-amino-acid oxidase.
     
 0.501
CTB6
Reductase.
    
  0.500
A0A2I0RGV1
Aldehyde reductase 2.
    
  0.500
A0A2I0RHL3
Putative NADPH-dependent methylglyoxal reductase GRP2.
    
  0.500
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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