STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0S2M3Carbonic anhydrase 9. (479 aa)    
Predicted Functional Partners:
A0A2I0S8K8
Ribosome biogenesis protein RPF2.
   
 
 0.856
A0A2I0S715
60S ribosomal protein L5.
    
 
 0.813
A0A2I0RTG1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.762
A0A2I0S1L3
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.757
A0A2I0S980
Ribosome assembly protein RRB1.
   
  
 0.752
A0A2I0RTJ6
Carbohydrate esterase family 3 protein.
    
 
 0.733
A0A2I0S2I0
Ribosome biogenesis protein SSF1.
   
    0.733
A0A2I0RVI4
25S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.710
A0A2I0S738
U3 small nucleolar RNA-associated protein 5.
   
    0.709
A0A2I0S5D4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
    0.701
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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