STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0S2N7Uncharacterized protein. (855 aa)    
Predicted Functional Partners:
A0A2I0S334
Transcription initiation factor TFIID subunit 5.
    
  0.600
A0A2I0RWY8
Pre-rRNA-processing protein IPI3.
    
  0.584
A0A2I0RMW6
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
  0.575
A0A2I0S857
Transcription initiation factor TFIID subunit 12.
    
  0.575
A0A2I0SA60
Transcription initiation factor TFIID subunit 9.
    
  0.571
A0A2I0RMT1
SAGA-associated factor 73.
    
  0.569
A0A2I0RUZ0
Protein SPT3.
    
  0.569
A0A2I0RQ89
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.561
A0A2I0RHJ4
Transcription initiation factor TFIID subunit 6.
    
  0.558
A0A2I0RJS3
Uncharacterized protein.
    
  0.536
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.