STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0S2X9Smad nuclear-interacting protein 1. (318 aa)    
Predicted Functional Partners:
A0A2I0RRY5
U2 snRNP component ist3.
   
 0.996
A0A2I0RX17
Pre-mRNA-splicing factor cwc26.
   
 0.987
A0A2I0S3X6
Pre-mRNA-splicing factor brr2.
   
 
 0.983
A0A2I0RWQ4
Pre-mRNA-processing protein 45.
    
 
 0.963
A0A2I0S4N9
Splicing factor 3B subunit 1.
    
 
 0.952
A0A2I0RXS5
Pre-mRNA-splicing factor cwc22.
   
 
 0.949
A0A2I0RVU5
PHD finger-like domain-containing protein 5A.
    
 
 0.946
A0A2I0RZI4
Peptidyl-prolyl cis-trans isomerase CWC27-like protein.
    
 0.936
A0A2I0SA41
Pre-mRNA-splicing factor cwc24.
   
 
 0.935
A0A2I0RWS2
Pre-mRNA-splicing factor sap61.
   
 
 0.933
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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