STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0S4K9Ubiquitin-like modifier HUB1. (234 aa)    
Predicted Functional Partners:
A0A2I0RTS6
Pre-mRNA-processing-splicing factor 8.
    
 
 0.979
A0A2I0RQX9
MFAP1 domain-containing protein.
    
 0.975
A0A2I0RM73
Pre-mRNA-splicing factor 38.
    
 0.972
A0A2I0S669
U4/U6.U5 small nuclear ribonucleoprotein component snu23.
    
 0.922
A0A2I0RS02
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
   
  0.917
A0A2I0RYN3
Pre-mRNA-processing factor 17.
    
  0.907
A0A2I0RRY5
U2 snRNP component ist3.
   
   0.884
A0A2I0RJ28
Small nuclear ribonucleoprotein G.
   
   0.871
A0A2I0RIY4
Pre-mRNA-splicing factor prp1.
    
 0.868
A0A2I0S4U5
Serine/arginine repetitive matrix protein 1.
    
  0.867
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.