STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0S6F4Epimerase domain-containing protein. (299 aa)    
Predicted Functional Partners:
A0A2I0RXC5
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.881
A0A2I0RL58
40S ribosomal protein S20.
   
  0.874
A0A2I0S0I1
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.871
A0A2I0S8V4
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.871
A0A2I0S9E7
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.869
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.867
A0A2I0RVD3
40S ribosomal protein S19.
   
 0.860
A0A2I0S2D7
40S ribosomal protein S16-A; Belongs to the universal ribosomal protein uS9 family.
   
 0.855
A0A2I0RM86
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.852
A0A2I0S0V2
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.851
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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