A0A2I0S794 protein (Cercospora zeina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2I0S794

Uncharacterized protein. (566 aa)

Predicted Functional Partners:

A0A2I0SAI4

0.926

A0A2I0RVN3

0.846

A0A2I0S741

0.789

A0A2I0RJ63

0.782

A0A2I0RIQ5

0.775

A0A2I0RNX2

0.773

A0A2I0RL38

0.770

A0A2I0RJ56

0.769

A0A2I0S0I5

0.769

A0A2I0S1Y2

0.766

Your Current Organism:

Cercospora zeina

NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I0RIQ5	A0A2I0RJ63	Cell division control protein 73.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.943
A0A2I0RIQ5	A0A2I0S0I5	Cell division control protein 73.	Uncharacterized protein.	0.999
A0A2I0RIQ5	A0A2I0S1Y2	Cell division control protein 73.	RNA polymerase II-associated protein 1-like protein.	0.999
A0A2I0RIQ5	A0A2I0S794	Cell division control protein 73.	Uncharacterized protein.	0.775
A0A2I0RJ56	A0A2I0RJ63	Negative regulator of mitosis.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.529
A0A2I0RJ56	A0A2I0RL38	Negative regulator of mitosis.	Uncharacterized protein.	0.999
A0A2I0RJ56	A0A2I0RNX2	Negative regulator of mitosis.	Anaphase-promoting complex subunit cut9.	0.999
A0A2I0RJ56	A0A2I0S794	Negative regulator of mitosis.	Uncharacterized protein.	0.769
A0A2I0RJ63	A0A2I0RIQ5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Cell division control protein 73.	0.943
A0A2I0RJ63	A0A2I0RJ56	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Negative regulator of mitosis.	0.529
A0A2I0RJ63	A0A2I0S0I5	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.940
A0A2I0RJ63	A0A2I0S1Y2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II-associated protein 1-like protein.	0.926
A0A2I0RJ63	A0A2I0S794	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.782
A0A2I0RL38	A0A2I0RJ56	Uncharacterized protein.	Negative regulator of mitosis.	0.999
A0A2I0RL38	A0A2I0RNX2	Uncharacterized protein.	Anaphase-promoting complex subunit cut9.	0.999
A0A2I0RL38	A0A2I0S794	Uncharacterized protein.	Uncharacterized protein.	0.770
A0A2I0RNX2	A0A2I0RJ56	Anaphase-promoting complex subunit cut9.	Negative regulator of mitosis.	0.999
A0A2I0RNX2	A0A2I0RL38	Anaphase-promoting complex subunit cut9.	Uncharacterized protein.	0.999
A0A2I0RNX2	A0A2I0S794	Anaphase-promoting complex subunit cut9.	Uncharacterized protein.	0.773
A0A2I0RVN3	A0A2I0S794	Peroxisomal NADH pyrophosphatase NUDT12.	Uncharacterized protein.	0.846