STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2I0S975SpoU_methylase domain-containing protein. (1236 aa)    
Predicted Functional Partners:
A0A2I0S4S4
54S ribosomal protein L4, mitochondrial.
   
 
 0.898
A0A2I0S3R2
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.893
A0A2I0RZV1
54S ribosomal protein L51, mitochondrial.
    
   0.878
A0A2I0RZW6
tRNA modification GTPase MSS1, mitochondrial.
   
 
 0.872
A0A2I0RL29
Multisubstrate pseudouridine synthase 7.
   
   0.868
A0A2I0S148
ATP-dependent RNA helicase mtr4.
   
    0.868
A0A2I0RW55
60S ribosomal protein L26-2.
  
   0.867
A0A2I0RVM2
Putative GTP-binding protein EngB.
   
 
 0.842
A0A2I0S7Z5
U3 small nucleolar RNA-associated protein 20.
   
    0.842
A0A2I0RKS1
Putative nitronate monooxygenase.
  
 
 0.801
Your Current Organism:
Cercospora zeina
NCBI taxonomy Id: 348901
Other names: C. zeina, CBS 118820, CPC 11995, CPC 11995 (ex-type)
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