STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET34344.1Di-glucose binding within endoplasmic reticulum. (468 aa)    
Predicted Functional Partners:
SET34366.1
Hypothetical protein.
 
  
  0.845
SET34400.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.749
SET34425.1
Exo-beta-1,3-glucanase, GH17 family.
     0.740
SET34319.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
     0.587
SET38479.1
Exo-1,4-beta-glucosidase.
 
  0.519
SET34270.1
Hexosaminidase.
  
  
  0.501
SET34495.1
Hypothetical protein.
 
     0.496
SET23947.1
Oligosaccharide 4-alpha-D-glucosyltransferase; Belongs to the glycosyl hydrolase 31 family.
  
  
  0.467
SET10862.1
Glycosidase.
  
     0.430
SET87633.1
Hexosaminidase.
  
  
  0.420
Your Current Organism:
Thalassotalea agarivorans
NCBI taxonomy Id: 349064
Other names: BCRC 17492, DSM 19706, JCM 13379, T. agarivorans, Thalassomonas agarivorans, Thalassomonas agarivorans Jean et al. 2006, Thalassotalea agarivorans (Jean et al. 2006) Zhang et al. 2014, marine bacterium JAMB-A33, strain TMA1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.