Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES65842.1 | SET37776.1 | SAMN05660429_00143 | SAMN05660429_01655 | TonB-dependent receptor. | Hypothetical protein. | 0.712 |
SES65842.1 | SET37810.1 | SAMN05660429_00143 | SAMN05660429_01656 | TonB-dependent receptor. | Tryptophan halogenase. | 0.732 |
SES65842.1 | SET38096.1 | SAMN05660429_00143 | SAMN05660429_01667 | TonB-dependent receptor. | Alkaline phosphatase D. | 0.477 |
SES97497.1 | SES97569.1 | SAMN05660429_00807 | SAMN05660429_00809 | TonB-dependent receptor. | Agarase. | 0.737 |
SES97497.1 | SES97693.1 | SAMN05660429_00807 | SAMN05660429_00812 | TonB-dependent receptor. | Agarase. | 0.637 |
SES97497.1 | SET37776.1 | SAMN05660429_00807 | SAMN05660429_01655 | TonB-dependent receptor. | Hypothetical protein. | 0.696 |
SES97497.1 | SET37810.1 | SAMN05660429_00807 | SAMN05660429_01656 | TonB-dependent receptor. | Tryptophan halogenase. | 0.760 |
SES97497.1 | SET37905.1 | SAMN05660429_00807 | SAMN05660429_01659 | TonB-dependent receptor. | Agarase. | 0.494 |
SES97497.1 | SET37963.1 | SAMN05660429_00807 | SAMN05660429_01662 | TonB-dependent receptor. | Agarase. | 0.592 |
SES97497.1 | SET38096.1 | SAMN05660429_00807 | SAMN05660429_01667 | TonB-dependent receptor. | Alkaline phosphatase D. | 0.405 |
SES97497.1 | SET85188.1 | SAMN05660429_00807 | SAMN05660429_02853 | TonB-dependent receptor. | Repeat domain-containing protein. | 0.536 |
SES97569.1 | SES97497.1 | SAMN05660429_00809 | SAMN05660429_00807 | Agarase. | TonB-dependent receptor. | 0.737 |
SES97569.1 | SES97693.1 | SAMN05660429_00809 | SAMN05660429_00812 | Agarase. | Agarase. | 0.625 |
SES97569.1 | SET37776.1 | SAMN05660429_00809 | SAMN05660429_01655 | Agarase. | Hypothetical protein. | 0.732 |
SES97569.1 | SET37869.1 | SAMN05660429_00809 | SAMN05660429_01658 | Agarase. | TonB-dependent receptor. | 0.770 |
SES97569.1 | SET37963.1 | SAMN05660429_00809 | SAMN05660429_01662 | Agarase. | Agarase. | 0.773 |
SES97569.1 | SET38096.1 | SAMN05660429_00809 | SAMN05660429_01667 | Agarase. | Alkaline phosphatase D. | 0.716 |
SES97569.1 | SET85188.1 | SAMN05660429_00809 | SAMN05660429_02853 | Agarase. | Repeat domain-containing protein. | 0.787 |
SES97693.1 | SES97497.1 | SAMN05660429_00812 | SAMN05660429_00807 | Agarase. | TonB-dependent receptor. | 0.637 |
SES97693.1 | SES97569.1 | SAMN05660429_00812 | SAMN05660429_00809 | Agarase. | Agarase. | 0.625 |
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