Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES98020.1 | SET85208.1 | SAMN05660429_00822 | SAMN05660429_02854 | Glutamate synthase (NADPH) large subunit. | TIGR00255 family protein. | 0.655 |
SET85188.1 | SET85208.1 | SAMN05660429_02853 | SAMN05660429_02854 | Repeat domain-containing protein. | TIGR00255 family protein. | 0.506 |
SET85188.1 | SET85240.1 | SAMN05660429_02853 | SAMN05660429_02855 | Repeat domain-containing protein. | Electron transfer DM13. | 0.507 |
SET85188.1 | pyrE | SAMN05660429_02853 | SAMN05660429_02860 | Repeat domain-containing protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.421 |
SET85208.1 | SES98020.1 | SAMN05660429_02854 | SAMN05660429_00822 | TIGR00255 family protein. | Glutamate synthase (NADPH) large subunit. | 0.655 |
SET85208.1 | SET85188.1 | SAMN05660429_02854 | SAMN05660429_02853 | TIGR00255 family protein. | Repeat domain-containing protein. | 0.506 |
SET85208.1 | SET85240.1 | SAMN05660429_02854 | SAMN05660429_02855 | TIGR00255 family protein. | Electron transfer DM13. | 0.568 |
SET85208.1 | SET85267.1 | SAMN05660429_02854 | SAMN05660429_02856 | TIGR00255 family protein. | Choline dehydrogenase. | 0.568 |
SET85208.1 | SET85294.1 | SAMN05660429_02854 | SAMN05660429_02857 | TIGR00255 family protein. | Gluconate 2-dehydrogenase subunit 3. | 0.571 |
SET85208.1 | SET85315.1 | SAMN05660429_02854 | SAMN05660429_02858 | TIGR00255 family protein. | Thioredoxin-like. | 0.568 |
SET85208.1 | coaD | SAMN05660429_02854 | SAMN05660429_01254 | TIGR00255 family protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.470 |
SET85208.1 | gmk | SAMN05660429_02854 | SAMN05660429_01776 | TIGR00255 family protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.514 |
SET85208.1 | pyrE | SAMN05660429_02854 | SAMN05660429_02860 | TIGR00255 family protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.453 |
SET85208.1 | rph | SAMN05660429_02854 | SAMN05660429_02859 | TIGR00255 family protein. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.524 |
SET85240.1 | SET85188.1 | SAMN05660429_02855 | SAMN05660429_02853 | Electron transfer DM13. | Repeat domain-containing protein. | 0.507 |
SET85240.1 | SET85208.1 | SAMN05660429_02855 | SAMN05660429_02854 | Electron transfer DM13. | TIGR00255 family protein. | 0.568 |
SET85240.1 | SET85267.1 | SAMN05660429_02855 | SAMN05660429_02856 | Electron transfer DM13. | Choline dehydrogenase. | 0.816 |
SET85240.1 | SET85294.1 | SAMN05660429_02855 | SAMN05660429_02857 | Electron transfer DM13. | Gluconate 2-dehydrogenase subunit 3. | 0.773 |
SET85240.1 | SET85315.1 | SAMN05660429_02855 | SAMN05660429_02858 | Electron transfer DM13. | Thioredoxin-like. | 0.808 |
SET85240.1 | pyrE | SAMN05660429_02855 | SAMN05660429_02860 | Electron transfer DM13. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.783 |
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