STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET90237.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
SET58092.1
Hypothetical protein.
  
     0.664
erpA
Iron-sulfur cluster insertion protein; Required for insertion of 4Fe-4S clusters for at least IspG.
  
    0.594
SES99568.1
Peptidase family M23.
  
     0.591
SET90256.1
H+/Cl-antiporter ClcA.
       0.590
SET90275.1
Putative membrane protein.
       0.590
SET08401.1
Protein of unknown function.
  
     0.538
SES72171.1
Type IV pilus assembly protein PilY1.
  
     0.478
SET83151.1
Protein of unknown function.
  
     0.473
SET19449.1
Hypothetical protein.
  
     0.453
SET51854.1
6-pyruvoyl tetrahydropterin synthase.
  
     0.421
Your Current Organism:
Thalassotalea agarivorans
NCBI taxonomy Id: 349064
Other names: BCRC 17492, DSM 19706, JCM 13379, T. agarivorans, Thalassomonas agarivorans, Thalassomonas agarivorans Jean et al. 2006, Thalassotalea agarivorans (Jean et al. 2006) Zhang et al. 2014, marine bacterium JAMB-A33, strain TMA1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.