STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM05183.1Thioredoxin; Belongs to the thioredoxin family. (105 aa)    
Predicted Functional Partners:
SDM05212.1
Thioredoxin reductase (NADPH).
 
 0.960
SDN25075.1
Thioredoxin domain-containing protein.
  
 0.917
SDN25120.1
Thioredoxin-disulfide reductase.
  
 0.917
SDM05143.1
DNA-binding transcriptional regulator, MarR family.
  
  
 0.786
SDM38959.1
Thioredoxin reductase.
  
 0.775
SDM79176.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.755
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.742
SDN52053.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.741
SDM63510.1
Uridine kinase.
   
 
 0.722
SDM18485.1
Glutamate synthase (ferredoxin).
   
 
 0.691
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.