STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM13952.1Alcohol dehydrogenase YqhD, Fe-dependent ADH family. (389 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
    0.825
SDN35871.1
4-hydroxybutyrate dehydrogenase.
  
  
 0.754
SDN34182.1
Aldo/keto reductase.
  
 
 0.561
SDM13918.1
Predicted N-acetyltransferase YhbS.
  
    0.543
SDM24508.1
DJ-1/PfpI family protein.
   
    0.535
SDM71743.1
Hypothetical protein.
   
    0.535
SDM35236.1
1-propanol dehydrogenase.
  
  
0.504
SDM63410.1
Alcohol dehydrogenase, class IV.
  
  
0.504
SDM99391.1
Alcohol dehydrogenase.
  
  
0.498
SDM23702.1
Lactaldehyde reductase.
  
  
0.490
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.