Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM22549.1 | glyQ | SAMN05660299_00461 | SAMN05660299_00463 | Hypothetical protein. | glycyl-tRNA synthetase alpha chain. | 0.549 |
SDM22549.1 | glyS | SAMN05660299_00461 | SAMN05660299_00462 | Hypothetical protein. | glycyl-tRNA synthetase beta chain. | 0.549 |
SDM22549.1 | rplS | SAMN05660299_00461 | SAMN05660299_00460 | Hypothetical protein. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.486 |
glyQ | SDM22549.1 | SAMN05660299_00463 | SAMN05660299_00461 | glycyl-tRNA synthetase alpha chain. | Hypothetical protein. | 0.549 |
glyQ | glyS | SAMN05660299_00463 | SAMN05660299_00462 | glycyl-tRNA synthetase alpha chain. | glycyl-tRNA synthetase beta chain. | 0.999 |
glyQ | rplS | SAMN05660299_00463 | SAMN05660299_00460 | glycyl-tRNA synthetase alpha chain. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.463 |
glyS | SDM22549.1 | SAMN05660299_00462 | SAMN05660299_00461 | glycyl-tRNA synthetase beta chain. | Hypothetical protein. | 0.549 |
glyS | glyQ | SAMN05660299_00462 | SAMN05660299_00463 | glycyl-tRNA synthetase beta chain. | glycyl-tRNA synthetase alpha chain. | 0.999 |
glyS | rplS | SAMN05660299_00462 | SAMN05660299_00460 | glycyl-tRNA synthetase beta chain. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.419 |
rplS | SDM22549.1 | SAMN05660299_00460 | SAMN05660299_00461 | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Hypothetical protein. | 0.486 |
rplS | glyQ | SAMN05660299_00460 | SAMN05660299_00463 | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | glycyl-tRNA synthetase alpha chain. | 0.463 |
rplS | glyS | SAMN05660299_00460 | SAMN05660299_00462 | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | glycyl-tRNA synthetase beta chain. | 0.419 |