STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM35447.1BMC domain-containing protein. (199 aa)    
Predicted Functional Partners:
SDM35412.1
Carboxysome shell and ethanolamine utilization microcompartment protein CcmK/EutM.
 
 
 0.988
SDM35271.1
Propionaldehyde dehydrogenase.
 
  
 0.820
SDM35725.1
Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN.
 
  
 0.805
SDM34712.1
Ethanolamine utilization protein EutS.
 
  
 0.801
SDM35340.1
Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.793
SDM35305.1
Ethanolamine utilization protein EutJ.
 
  
 0.792
SDM35555.1
Microcompartment protein PduB.
 
  
 0.791
SDM35480.1
Hypothetical protein.
       0.759
SDM34741.1
Ethanolamine utilization protein EutP; Belongs to the EutP/PduV family.
 
  
 0.733
SDM35517.1
BMC domain-containing protein.
 
   
0.636
Your Current Organism:
Megasphaera paucivorans
NCBI taxonomy Id: 349095
Other names: DSM 16981, M. paucivorans, Megasphaera paucivorans Juvonen and Suihko 2006, VTT E-032341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.