Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM04580.1 | SDM35877.1 | SAMN05660299_00069 | SAMN05660299_00754 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Helix-turn-helix domain-containing protein. | 0.415 |
SDM04580.1 | SDM94797.1 | SAMN05660299_00069 | SAMN05660299_01820 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.999 |
SDM04580.1 | SDN23755.1 | SAMN05660299_00069 | SAMN05660299_02380 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Acetyltransferase (GNAT) family protein. | 0.561 |
SDM04580.1 | SDN33263.1 | SAMN05660299_00069 | SAMN05660299_02532 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SDM35877.1 | SDM04580.1 | SAMN05660299_00754 | SAMN05660299_00069 | Helix-turn-helix domain-containing protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.415 |
SDM35877.1 | SDM56646.1 | SAMN05660299_00754 | SAMN05660299_01122 | Helix-turn-helix domain-containing protein. | Sugar phosphate permease. | 0.448 |
SDM35877.1 | SDM94797.1 | SAMN05660299_00754 | SAMN05660299_01820 | Helix-turn-helix domain-containing protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.415 |
SDM35877.1 | SDN04095.1 | SAMN05660299_00754 | SAMN05660299_01988 | Helix-turn-helix domain-containing protein. | Predicted arabinose efflux permease, MFS family. | 0.541 |
SDM35877.1 | SDN04135.1 | SAMN05660299_00754 | SAMN05660299_01989 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, TetR family. | 0.569 |
SDM35877.1 | SDN10152.1 | SAMN05660299_00754 | SAMN05660299_02107 | Helix-turn-helix domain-containing protein. | Acetoacetate decarboxylase. | 0.486 |
SDM35877.1 | SDN23714.1 | SAMN05660299_00754 | SAMN05660299_02379 | Helix-turn-helix domain-containing protein. | DNA-binding transcriptional regulator, MarR family. | 0.464 |
SDM35877.1 | SDN23755.1 | SAMN05660299_00754 | SAMN05660299_02380 | Helix-turn-helix domain-containing protein. | Acetyltransferase (GNAT) family protein. | 0.533 |
SDM35877.1 | SDN33263.1 | SAMN05660299_00754 | SAMN05660299_02532 | Helix-turn-helix domain-containing protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.415 |
SDM35877.1 | cinA | SAMN05660299_00754 | SAMN05660299_00930 | Helix-turn-helix domain-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.519 |
SDM56646.1 | SDM35877.1 | SAMN05660299_01122 | SAMN05660299_00754 | Sugar phosphate permease. | Helix-turn-helix domain-containing protein. | 0.448 |
SDM94797.1 | SDM04580.1 | SAMN05660299_01820 | SAMN05660299_00069 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SDM94797.1 | SDM35877.1 | SAMN05660299_01820 | SAMN05660299_00754 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | Helix-turn-helix domain-containing protein. | 0.415 |
SDM94797.1 | SDN23755.1 | SAMN05660299_01820 | SAMN05660299_02380 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | Acetyltransferase (GNAT) family protein. | 0.561 |
SDM94797.1 | SDN33263.1 | SAMN05660299_01820 | SAMN05660299_02532 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.999 |
SDN04095.1 | SDM35877.1 | SAMN05660299_01988 | SAMN05660299_00754 | Predicted arabinose efflux permease, MFS family. | Helix-turn-helix domain-containing protein. | 0.541 |
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